IL_8CRE_043

3D structure

PDB id

8CRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GCGAAU*AAAC

Length

10 nucleotides

Bulged bases

8CRE|1|1|G|997

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_26222.2

Basepair signature

cWW-cWS-cSH-tWH-R-L-R-cWW

Number of instances in this motif group

6

Unit IDs

8CRE|1|1|G|995
8CRE|1|1|C|996
8CRE|1|1|G|997
8CRE|1|1|A|998
8CRE|1|1|A|999
8CRE|1|1|U|1000
*
8CRE|1|1|A|1042
8CRE|1|1|A|1043
8CRE|1|1|A|1044
8CRE|1|1|C|1045

Current chains

Chain 1

25S

Nearby chains

Chain 2

60S ribosomal protein L21-A

Chain 3

5S ribosomal RNA; 5S rRNA

Chain m

Uncharacterized protein CaJ7.0206

Chain r

60S ribosomal protein L10