3D structure

PDB id
8CRE (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
AUUA*UUCU
Length
8 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_77658.1
Basepair signature
cWW-cWW-cWW-cWW
Number of instances in this motif group
34

Unit IDs

8CRE|1|1|A|1002
8CRE|1|1|U|1003
8CRE|1|1|U|1004
8CRE|1|1|A|1005
*
8CRE|1|1|U|1037
8CRE|1|1|U|1038
8CRE|1|1|C|1039
8CRE|1|1|U|1040

Current chains

Chain 1
25S

Nearby chains

Chain m
Uncharacterized protein CaJ7.0206
Chain r
60S ribosomal protein L10

Coloring options:

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