IL_8CRE_060

3D structure

PDB id

8CRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

AUUG*CUUU

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77658.1

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

34

Unit IDs

8CRE|1|1|A|1339
8CRE|1|1|U|1340
8CRE|1|1|U|1341
8CRE|1|1|G|1342
*
8CRE|1|1|C|1354
8CRE|1|1|U|1355
8CRE|1|1|U|1356
8CRE|1|1|U|1357

Current chains

Chain 1

25S

Nearby chains

Chain AF

60S ribosomal protein L32

Chain l

60S ribosomal protein L4-B

Chain n

60S ribosomal protein L6

Chain o

60S ribosomal protein L7-A

Chain y

60S ribosomal protein L18-A