IL_8CRE_066

3D structure

PDB id

8CRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UCAAC*GGA

Length

8 nucleotides

Bulged bases

8CRE|1|1|G|1510

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_63596.11

Basepair signature

cWW-cWS-cSH-tWH-cWW-L

Number of instances in this motif group

19

Unit IDs

8CRE|1|1|U|1497
8CRE|1|1|C|1498
8CRE|1|1|A|1499
8CRE|1|1|A|1500
8CRE|1|1|C|1501
*
8CRE|1|1|G|1509
8CRE|1|1|G|1510
8CRE|1|1|A|1511

Current chains

Chain 1

25S

Nearby chains

Chain AM

60S ribosomal protein L39

Chain x

Ribosomal protein L22

Chain z

60S ribosomal protein L19-A