3D structure

PDB id
8CRE (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
UCUUC*GGAAUA
Length
11 nucleotides
Bulged bases
8CRE|1|1|U|1625, 8CRE|1|1|U|1811
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_56317.1
Basepair signature
cWW-L-R-L-R-L-cWW
Number of instances in this motif group
2

Unit IDs

8CRE|1|1|U|1623
8CRE|1|1|C|1624
8CRE|1|1|U|1625
8CRE|1|1|U|1626
8CRE|1|1|C|1627
*
8CRE|1|1|G|1807
8CRE|1|1|G|1808
8CRE|1|1|A|1809
8CRE|1|1|A|1810
8CRE|1|1|U|1811
8CRE|1|1|A|1812

Current chains

Chain 1
25S

Nearby chains

Chain AA
60S ribosomal protein L27

Coloring options:

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