Motif IL_56317.1 Version IL_56317.1 of this group appears in releases 3.95 to 3.97
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 1-9 | 5-6 | 6-8 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_8P9A_294 | 8P9A | 0.0000 | 2 | AR | LSU rRNA | G | 1811 | G | 1812 | A | 1813 | A | 1814 | A | 1816 | * | U | 1627 | C | 1628 | U | 1630 | C | 1631 | cWW | cWW | ncSs |
| 2 | IL_8CRE_071 | 8CRE | 0.1978 | 2 | 1 | LSU rRNA | G | 1807 | G | 1808 | A | 1809 | A | 1810 | A | 1812 | * | U | 1623 | C | 1624 | U | 1626 | C | 1627 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGAAUA*UCUUC | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GAAU*CUU | 2 |
- Annotations
-
- (2)
- Basepair signature
- cWW-L-R-L-R-L-cWW
- Heat map statistics
- Min 0.20 | Avg 0.10 | Max 0.20
Coloring options: