IL_8CRE_072

3D structure

PDB id

8CRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UGAAU*AGGAA

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_50730.2

Basepair signature

cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

19

Unit IDs

8CRE|1|1|U|1641
8CRE|1|1|G|1642
8CRE|1|1|A|1643
8CRE|1|1|A|1644
8CRE|1|1|U|1645
*
8CRE|1|1|A|1802
8CRE|1|1|G|1803
8CRE|1|1|G|1804
8CRE|1|1|A|1805
8CRE|1|1|A|1806

Current chains

Chain 1

25S

Nearby chains

Chain AA

60S ribosomal protein L27

Chain AH

60S ribosomal protein L34-B

Chain j

60S ribosomal protein L2-B