IL_8CRE_103
3D structure
- PDB id
- 8CRE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GGUGUAGAAUAAGUG*CUACC
- Length
- 20 nucleotides
- Bulged bases
- 8CRE|1|1|U|2431, 8CRE|1|1|U|2438
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8CRE_103 not in the Motif Atlas
- Homologous match to IL_8C3A_104
- Geometric discrepancy: 0.0329
- The information below is about IL_8C3A_104
- Detailed Annotation
- Other IL
- Broad Annotation
- Other IL
- Motif group
- IL_95459.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-cWW-L-L-R-L-R-L-R
- Number of instances in this motif group
- 1
Unit IDs
8CRE|1|1|G|2429
8CRE|1|1|G|2430
8CRE|1|1|U|2431
8CRE|1|1|G|2432
8CRE|1|1|U|2433
8CRE|1|1|A|2434
8CRE|1|1|G|2435
8CRE|1|1|A|2436
8CRE|1|1|A|2437
8CRE|1|1|U|2438
8CRE|1|1|A|2439
8CRE|1|1|A|2440
8CRE|1|1|G|2441
8CRE|1|1|U|2442
8CRE|1|1|G|2443
*
8CRE|1|1|C|2470
8CRE|1|1|U|2471
8CRE|1|1|A|2472
8CRE|1|1|C|2473
8CRE|1|1|C|2474
Current chains
- Chain 1
- 25S
Nearby chains
- Chain AJ
- 60S ribosomal protein L36
- Chain l1
- Ribosomal protein
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