3D structure

PDB id
8CRE (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
CC*GUUG
Length
6 nucleotides
Bulged bases
8CRE|1|1|U|3319, 8CRE|1|1|U|3320
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_84476.1
Basepair signature
cWW-cWW
Number of instances in this motif group
13

Unit IDs

8CRE|1|1|C|3314
8CRE|1|1|C|3315
*
8CRE|1|1|G|3318
8CRE|1|1|U|3319
8CRE|1|1|U|3320
8CRE|1|1|G|3321

Current chains

Chain 1
25S

Nearby chains

Chain K
40S ribosomal protein S8

Coloring options:

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