IL_8CRE_269
3D structure
- PDB id
- 8CRE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CAUA*UAAGCG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8CRE_269 not in the Motif Atlas
- Geometric match to IL_8C3A_486
- Geometric discrepancy: 0.0615
- The information below is about IL_8C3A_486
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_28976.1
- Basepair signature
- cWW-L-cWW-cSH-R-cWW
- Number of instances in this motif group
- 2
Unit IDs
8CRE|1|AS|C|2861
8CRE|1|AS|A|2862
8CRE|1|AS|U|2863
8CRE|1|AS|A|2864
*
8CRE|1|AS|U|2881
8CRE|1|AS|A|2882
8CRE|1|AS|A|2883
8CRE|1|AS|G|2884
8CRE|1|AS|C|2885
8CRE|1|AS|G|2886
Current chains
- Chain AS
- 25S
Nearby chains
- Chain AX
- 60S ribosomal protein L3
- Chain BD
- 60S ribosomal protein L9-B
- Chain BQ
- 60S ribosomal protein L23-A
- Chain CH
- 60S ribosomal protein L40-B
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