Motif IL_28976.1 Version IL_28976.1 of this group appears in releases 3.88 to 3.88
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 1-10 | 2-9 | 3-5 | 3-6 | 3-7 | 4-9 | 5-8 | 6-7 | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_8C3A_486 | 8C3A | 0.0000 | 0 | 1 | LSU rRNA | U | 2881 | A | 2882 | A | 2883 | G | 2884 | C | 2885 | G | 2886 | * | C | 2861 | A | 2862 | U | 2863 | A | 2864 | cWW | ncSH | ncSH | cWB | cWW | ncWW | cWW | |
2 | IL_5TBW_475 | 5TBW | 0.0796 | 0 | 1 | LSU rRNA | U | 2909 | A | 2910 | A | 2911 | G | 2912 | C | 2913 | G | 2914 | * | C | 2889 | A | 2890 | U | 2891 | A | 2892 | cWW | tSH | cSH | ncSH | cWB | cWW | ncWWa | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
UAAGCG*CAUA | 2 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
AAGC*AU | 2 |
Release history
Release | 3.88 |
---|---|
Date | 2024-09-11 |
Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-L-cWW-cSH-R-cWW
- Heat map statistics
- Min 0.08 | Avg 0.04 | Max 0.08
Coloring options: