IL_8CRE_279
3D structure
- PDB id
- 8CRE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- AUUAU*AGAAU
- Length
- 10 nucleotides
- Bulged bases
- 8CRE|1|AS|A|3102
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8CRE_279 not in the Motif Atlas
- Homologous match to IL_8C3A_129
- Geometric discrepancy: 0.0574
- The information below is about IL_8C3A_129
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_89002.4
- Basepair signature
- cWW-tWH-cWW-L-cWW-tHS
- Number of instances in this motif group
- 15
Unit IDs
8CRE|1|AS|A|3075
8CRE|1|AS|U|3076
8CRE|1|AS|U|3077
8CRE|1|AS|A|3078
8CRE|1|AS|U|3079
*
8CRE|1|AS|A|3099
8CRE|1|AS|G|3100
8CRE|1|AS|A|3101
8CRE|1|AS|A|3102
8CRE|1|AS|U|3103
Current chains
- Chain AS
- 25S
Nearby chains
- Chain BD
- 60S ribosomal protein L9-B
- Chain BJ
- Ribosomal protein L13
- Chain CH
- 60S ribosomal protein L40-B
Coloring options: