IL_8CRE_289
3D structure
- PDB id
- 8CRE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UGUAAG*CUGAG
- Length
- 11 nucleotides
- Bulged bases
- 8CRE|1|AS|G|3334
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8CRE_289 not in the Motif Atlas
- Homologous match to IL_8C3A_139
- Geometric discrepancy: 0.0512
- The information below is about IL_8C3A_139
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_83162.8
- Basepair signature
- cWW-cWW-tSH-cWW-tHH-L
- Number of instances in this motif group
- 4
Unit IDs
8CRE|1|AS|U|3297
8CRE|1|AS|G|3298
8CRE|1|AS|U|3299
8CRE|1|AS|A|3300
8CRE|1|AS|A|3301
8CRE|1|AS|G|3302
*
8CRE|1|AS|C|3332
8CRE|1|AS|U|3333
8CRE|1|AS|G|3334
8CRE|1|AS|A|3335
8CRE|1|AS|G|3336
Current chains
- Chain AS
- 25S
Nearby chains
- Chain AX
- 60S ribosomal protein L3
- Chain BR
- 60S ribosomal protein L24-A
- Chain BY
- 60S ribosomal protein L31-B
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