IL_8CRE_403

3D structure

PDB id

8CRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GUA*UUUUC

Length

8 nucleotides

Bulged bases

8CRE|1|CM|U|258

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_51387.2

Basepair signature

cWW-cSH-cWW-cWW

Number of instances in this motif group

20

Unit IDs

8CRE|1|CM|G|202
8CRE|1|CM|U|203
8CRE|1|CM|A|204
*
8CRE|1|CM|U|257
8CRE|1|CM|U|258
8CRE|1|CM|U|259
8CRE|1|CM|U|260
8CRE|1|CM|C|261

Current chains

Chain CM

18S

Nearby chains

Chain CR

40S ribosomal protein S4

Chain CV

40S ribosomal protein S8