IL_8CRE_408

3D structure

PDB id

8CRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UAUCAA*UUUCAACG

Length

14 nucleotides

Bulged bases

8CRE|1|CM|U|311, 8CRE|1|CM|C|349

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_46174.3

Basepair signature

cWW-cSS-tSS-tSH-L-cWW-tHW-cWW

Number of instances in this motif group

5

Unit IDs

8CRE|1|CM|U|309
8CRE|1|CM|A|310
8CRE|1|CM|U|311
8CRE|1|CM|C|312
8CRE|1|CM|A|313
8CRE|1|CM|A|314
*
8CRE|1|CM|U|346
8CRE|1|CM|U|347
8CRE|1|CM|U|348
8CRE|1|CM|C|349
8CRE|1|CM|A|350
8CRE|1|CM|A|351
8CRE|1|CM|C|352
8CRE|1|CM|G|353

Current chains

Chain CM

18S

Nearby chains

Chain CV

40S ribosomal protein S8

Chain CY

40S ribosomal protein S11A

Chain DK

Ribosomal protein S23 (S12)