IL_8CRE_437

3D structure

PDB id

8CRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GGGAUC*GUC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_97273.1

Basepair signature

cWW-tSH-cWW-L-cWW-L

Number of instances in this motif group

3

Unit IDs

8CRE|1|CM|G|970
8CRE|1|CM|G|971
8CRE|1|CM|G|972
8CRE|1|CM|A|973
8CRE|1|CM|U|974
8CRE|1|CM|C|975
*
8CRE|1|CM|G|999
8CRE|1|CM|U|1000
8CRE|1|CM|C|1001

Current chains

Chain CM

18S

Nearby chains

Chain AS

Large subunit ribosomal RNA; LSU rRNA

Chain AW

60S ribosomal protein L2-B

Chain CK

60S ribosomal protein L43-A

Chain DB

40S ribosomal protein S14-A

Chain DN

40S ribosomal protein S26