Motif IL_31690.2 Version IL_31690.2 of this group appears in releases 4.14 to 4.14
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 1-9 | 2-8 | 3-7 | 3-8 | 5-8 | 6-7 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_8GLP_317 | 8GLP | 0.6707 | 2 | L5 | LSU rRNA | A | 4624 | C | 4625 | A | 4626 | U | 4627 | PSU | 4628 | U | 4629 | * | A | 4669 | A | 4672 | PSU | 4673 | cWW | cWW | tHH | ncWS | cWW | ||
| 2 | IL_8GLP_241 | 8GLP | 0.1028 | 0 | Other IL (H) | S2 | SSU rRNA | A | 1042 | G | 1043 | G | 1044 | U | 1045 | U | 1046 | C | 1047 | * | G | 1071 | U | 1072 | U | 1073 | cWW | ntSH | cWw | cWW | ||
| 3 | IL_9H3G_203 | 9H3G | 0.0000 | 0 | h1 | SSU rRNA | G | 986 | G | 987 | G | 988 | C | 989 | U | 990 | C | 991 | * | G | 1015 | U | 1016 | C | 1017 | cWW | cWw | cWW | ||||
| 4 | IL_8CRE_437 | 8CRE | 0.0868 | 0 | CM | SSU rRNA | G | 970 | G | 971 | G | 972 | A | 973 | U | 974 | C | 975 | * | G | 999 | U | 1000 | C | 1001 | cWW | ntSH | cWw | cWW | |||
| 5 | IL_9PN5_189 | 9PN5 | 0.0718 | 0 | B5 | SSU rRNA | G | 985 | G | 986 | G | 987 | A | 988 | U | 989 | C | 990 | * | G | 1014 | U | 1015 | C | 1016 | cWW | cWw | cWW | ||||
| 6 | IL_9SUM_183 | 9SUM | 0.0975 | 0 | CA | SSU rRNA | G | 955 | G | 956 | G | 957 | A | 958 | U | 959 | C | 960 | * | G | 984 | U | 985 | C | 986 | cWW | cWw | cWW | ||||
| 7 | IL_9SUM_131 | 9SUM | 0.5189 | 0 | B | 5S rRNA | C | 48 | G | 49 | A | 50 | G | 51 | C | 52 | G | 53 | * | C | 29 | U | 30 | G | 31 | cWW | ncWB | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGGAUC*GUC | 3 |
| ACAU(PSU)U*ACCA(PSU) | 1 |
| AGGUUC*GUU | 1 |
| GGGCUC*GUC | 1 |
| CGAGCG*CUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GGAU*U | 3 |
| CAU(PSU)*CCA | 1 |
| GGUU*U | 1 |
| GGCU*U | 1 |
| GAGC*U | 1 |
Release history
| Release | 4.14 |
|---|---|
| Date | 2026-09-09 |
| Status | Updated, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (6)
- Other IL (H) (1)
- Basepair signature
- cWW-L-cWW-L-cWW-L
- Heat map statistics
- Min 0.07 | Avg 0.32 | Max 0.79
Coloring options: