IL_8CRE_463

3D structure

PDB id

8CRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GUAUAAGC*GAAAUC

Length

14 nucleotides

Bulged bases

8CRE|1|CM|A|1476, 8CRE|1|CM|U|1477, 8CRE|1|CM|A|1479, 8CRE|1|CM|A|1503, 8CRE|1|CM|U|1504

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_22564.1

Basepair signature

cWW-L-R-L-R-L-cWW

Number of instances in this motif group

2

Unit IDs

8CRE|1|CM|G|1474
8CRE|1|CM|U|1475
8CRE|1|CM|A|1476
8CRE|1|CM|U|1477
8CRE|1|CM|A|1478
8CRE|1|CM|A|1479
8CRE|1|CM|G|1480
8CRE|1|CM|C|1481
*
8CRE|1|CM|G|1500
8CRE|1|CM|A|1501
8CRE|1|CM|A|1502
8CRE|1|CM|A|1503
8CRE|1|CM|U|1504
8CRE|1|CM|C|1505

Current chains

Chain CM

18S

Nearby chains

Chain CQ

Ribosomal protein S3

Chain DH

Ribosomal protein S10

Chain DQ

40S ribosomal protein S29A