Motif IL_12629.2 Version IL_12629.2 of this group appears in releases 4.14 to 4.14
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 1-6 | 1-9 | 2-8 | 5-6 | 6-8 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_9PN5_217 | 9PN5 | 0.4999 | 4 | B5 | SSU rRNA | G | 1488 | U | 1489 | A | 1492 | A | 1493 | C | 1494 | * | G | 1513 | U | 1514 | A | 1515 | C | 1518 | tSS | cWW | ntWW | cWW | ||
| 2 | IL_8CRE_463 | 8CRE | 0.0000 | 5 | 180 degree turn (H) | CM | SSU rRNA | G | 1474 | U | 1475 | A | 1478 | G | 1480 | C | 1481 | * | G | 1500 | A | 1501 | A | 1502 | C | 1505 | ntSS | cWW | cWW | ||
| 3 | IL_9SUM_213 | 9SUM | 0.4821 | 3 | CA | SSU rRNA | G | 1464 | U | 1465 | U | 1466 | A | 1468 | C | 1469 | * | G | 1488 | A | 1489 | A | 1490 | C | 1493 | cWW | cWW | ncSs |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUCUAAC*GUAAUC | 1 |
| GUAUAAGC*GAAAUC | 1 |
| GUUGAC*GAAAUC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UCUAA*UAAU | 1 |
| UAUAAG*AAAU | 1 |
| UUGA*AAAU | 1 |
Release history
| Release | 4.14 |
|---|---|
| Date | 2026-09-09 |
| Status | Updated, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- 180 degree turn (H) (1)
- Basepair signature
- cWW-tSS-L-R-L-R-L-cWW
- Heat map statistics
- Min 0.48 | Avg 0.39 | Max 0.78
Coloring options: