3D structure

PDB id
8CRE (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
CCG*CAAG
Length
7 nucleotides
Bulged bases
8CRE|1|CM|C|1624, 8CRE|1|CM|A|1753
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_61438.4
Basepair signature
cWW-L-cWW
Number of instances in this motif group
4

Unit IDs

8CRE|1|CM|C|1623
8CRE|1|CM|C|1624
8CRE|1|CM|G|1625
*
8CRE|1|CM|C|1751
8CRE|1|CM|A|1752
8CRE|1|CM|A|1753
8CRE|1|CM|G|1754

Current chains

Chain CM
18S

Nearby chains

Chain CL
60S ribosomal protein CAALFM_C304810CA
Chain DN
40S ribosomal protein S26

Coloring options:

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