IL_8CRX_030

3D structure

PDB id

8CRX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline bound

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

GAA*UUUC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8CRX_030 not in the Motif Atlas

Geometric match to IL_2O3X_003

Geometric discrepancy: 0.1648

The information below is about IL_2O3X_003

Detailed Annotation

Decoding loop related

Broad Annotation

Decoding loop related

Motif group

IL_53541.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

12

Unit IDs

8CRX|1|A|G|639
8CRX|1|A|A|640
8CRX|1|A|A|641
*
8CRX|1|A|U|728
8CRX|1|A|U|729
8CRX|1|A|U|730
8CRX|1|A|C|731

Current chains

Chain A

RNA (1537-MER)

Nearby chains

Chain H

30S ribosomal protein S8

Chain O

30S ribosomal protein S15