IL_8CRX_035
3D structure
- PDB id
- 8CRX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- CGAAC*GGUAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8CRX_035 not in the Motif Atlas
- Homologous match to IL_4LFB_033
- Geometric discrepancy: 0.0739
- The information below is about IL_4LFB_033
- Detailed Annotation
- tSH-tWH-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_05821.2
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 19
Unit IDs
8CRX|1|A|C|761
8CRX|1|A|G|762
8CRX|1|A|A|763
8CRX|1|A|A|764
8CRX|1|A|C|765
*
8CRX|1|A|G|781
8CRX|1|A|G|782
8CRX|1|A|U|783
8CRX|1|A|A|784
8CRX|1|A|G|785
Current chains
- Chain A
- RNA (1537-MER)
Nearby chains
- Chain K
- 30S ribosomal protein S11
- Chain a
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: