IL_8CRX_037

3D structure

PDB id

8CRX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline bound

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

GA*UAC

Length

5 nucleotides

Bulged bases

8CRX|1|A|A|1381

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8CRX_037 not in the Motif Atlas

Homologous match to IL_4LFB_035

Geometric discrepancy: 0.079

The information below is about IL_4LFB_035

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_14190.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

175

Unit IDs

8CRX|1|A|G|906
8CRX|1|A|A|907
*
8CRX|1|A|U|1380
8CRX|1|A|A|1381
8CRX|1|A|C|1382

Current chains

Chain A

RNA (1537-MER)

Nearby chains

Chain E

30S ribosomal protein S5

Chain X

30S ribosomal protein bS22