IL_8CRX_038

3D structure

PDB id

8CRX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline bound

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

GGG*UU

Length

5 nucleotides

Bulged bases

8CRX|1|A|G|910

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8CRX_038 not in the Motif Atlas

Homologous match to IL_4LFB_036

Geometric discrepancy: 0.0965

The information below is about IL_4LFB_036

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_28408.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

76

Unit IDs

8CRX|1|A|G|909
8CRX|1|A|G|910
8CRX|1|A|G|911
*
8CRX|1|A|U|1377
8CRX|1|A|U|1378

Current chains

Chain A

RNA (1537-MER)

Nearby chains

Chain Y

32MF mRNA