IL_8CRX_046
3D structure
- PDB id
- 8CRX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- UGCAU*AUG
- Length
- 8 nucleotides
- Bulged bases
- 8CRX|1|A|C|1039
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8CRX_046 not in the Motif Atlas
- Homologous match to IL_4LFB_044
- Geometric discrepancy: 0.0697
- The information below is about IL_4LFB_044
- Detailed Annotation
- Isolated cWS basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_82453.2
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 6
Unit IDs
8CRX|1|A|U|1037
8CRX|1|A|G|1038
8CRX|1|A|C|1039
8CRX|1|A|A|1040
8CRX|1|A|U|1041
*
8CRX|1|A|A|1190
8CRX|1|A|U|1191
8CRX|1|A|G|1192
Current chains
- Chain A
- RNA (1537-MER)
Nearby chains
- Chain G
- 30S ribosomal protein S3
- Chain M
- 30S ribosomal protein S10
- Chain S
- 30S ribosomal protein S14 type Z
- Chain Y
- 32MF mRNA
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