IL_8CRX_048
3D structure
- PDB id
- 8CRX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- UG*CAA
- Length
- 5 nucleotides
- Bulged bases
- 8CRX|1|A|A|1182
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8CRX_048 not in the Motif Atlas
- Homologous match to IL_5J7L_049
- Geometric discrepancy: 0.1207
- The information below is about IL_5J7L_049
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.7
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 132
Unit IDs
8CRX|1|A|U|1045
8CRX|1|A|G|1046
*
8CRX|1|A|C|1181
8CRX|1|A|A|1182
8CRX|1|A|A|1183
Current chains
- Chain A
- RNA (1537-MER)
Nearby chains
- Chain E
- 30S ribosomal protein S5
- Chain G
- 30S ribosomal protein S3
- Chain M
- 30S ribosomal protein S10
- Chain S
- 30S ribosomal protein S14 type Z
- Chain Y
- 32MF mRNA
Coloring options: