IL_8CRX_055

3D structure

PDB id

8CRX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline bound

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

CGAG*UGAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8CRX_055 not in the Motif Atlas

Geometric match to IL_1SAQ_002

Geometric discrepancy: 0.2436

The information below is about IL_1SAQ_002

Detailed Annotation

Double sheared

Broad Annotation

Double sheared

Motif group

IL_09705.13

Basepair signature

cWW-tSH-tHS-cWW

Number of instances in this motif group

34

Unit IDs

8CRX|1|A|C|1245
8CRX|1|A|G|1246
8CRX|1|A|A|1247
8CRX|1|A|G|1248
*
8CRX|1|A|U|1259
8CRX|1|A|G|1260
8CRX|1|A|A|1261
8CRX|1|A|G|1262

Current chains

Chain A

RNA (1537-MER)

Nearby chains