IL_8CRX_075
3D structure
- PDB id
- 8CRX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- GGAAGUG*CUUAGUAC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8CRX_075 not in the Motif Atlas
- Homologous match to IL_5J7L_250
- Geometric discrepancy: 0.0746
- The information below is about IL_5J7L_250
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_04346.10
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 15
Unit IDs
8CRX|1|a|G|195
8CRX|1|a|G|196
8CRX|1|a|A|197
8CRX|1|a|A|198
8CRX|1|a|G|199
8CRX|1|a|U|200
8CRX|1|a|G|201
*
8CRX|1|a|C|208
8CRX|1|a|U|209
8CRX|1|a|U|210
8CRX|1|a|A|211
8CRX|1|a|G|212
8CRX|1|a|U|213
8CRX|1|a|A|214
8CRX|1|a|C|215
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain 2
- 50S ribosomal protein L35
- Chain k
- 50S ribosomal protein L15
- Chain w
- 50S ribosomal protein L28
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