IL_8CRX_088

3D structure

PDB id

8CRX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline bound

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

GUC*GUC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8CRX_088 not in the Motif Atlas

Homologous match to IL_4WF9_025

Geometric discrepancy: 0.3897

The information below is about IL_4WF9_025

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8CRX|1|a|G|794
8CRX|1|a|U|795
8CRX|1|a|C|796
*
8CRX|1|a|G|805
8CRX|1|a|U|806
8CRX|1|a|C|807

Current chains

Chain a

23S ribosomal RNA

Nearby chains

Chain O

30S ribosomal protein S15

Chain c

50S ribosomal protein L2