IL_8CRX_121

3D structure

PDB id

8CRX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline bound

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

CACC*GUGG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8CRX_121 not in the Motif Atlas

Geometric match to IL_6CZR_168

Geometric discrepancy: 0.2293

The information below is about IL_6CZR_168

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_67743.1

Basepair signature

cWW-cWW-cWH-cWW

Number of instances in this motif group

9

Unit IDs

8CRX|1|a|C|1489
8CRX|1|a|A|1490
8CRX|1|a|C|1491
8CRX|1|a|C|1492
*
8CRX|1|a|G|1770
8CRX|1|a|U|1771
8CRX|1|a|G|1772
8CRX|1|a|G|1773

Current chains

Chain a

23S ribosomal RNA

Nearby chains