IL_8CRX_184
3D structure
- PDB id
- 8CRX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- GGAAU*GGAAC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8CRX_184 not in the Motif Atlas
- Homologous match to IL_4LFB_065
- Geometric discrepancy: 0.0661
- The information below is about IL_4LFB_065
- Detailed Annotation
- Triple non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_71154.4
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 18
Unit IDs
8CRX|1|A|G|655
8CRX|1|A|G|656
8CRX|1|A|A|657
8CRX|1|A|A|658
8CRX|1|A|U|659
*
8CRX|1|A|G|695
8CRX|1|A|G|696
8CRX|1|A|A|697
8CRX|1|A|A|698
8CRX|1|A|C|699
Current chains
- Chain A
- RNA (1537-MER)
Nearby chains
- Chain F
- 30S ribosomal protein S6
- Chain K
- 30S ribosomal protein S11
- Chain R
- 30S ribosomal protein S18
- Chain c
- 50S ribosomal protein L2
Coloring options: