IL_8CRX_188
3D structure
- PDB id
- 8CRX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- (5MC)AA*UAAG
- Length
- 7 nucleotides
- Bulged bases
- 8CRX|1|A|A|1480
- QA status
- Modified nucleotides: 5MC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8CRX_188 not in the Motif Atlas
- Geometric match to IL_8UO6_002
- Geometric discrepancy: 0.2645
- The information below is about IL_8UO6_002
- Detailed Annotation
- Single bulged A
- Broad Annotation
- Single bulged A
- Motif group
- IL_53541.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 12
Unit IDs
8CRX|1|A|5MC|1394
8CRX|1|A|A|1395
8CRX|1|A|A|1396
*
8CRX|1|A|U|1478
8CRX|1|A|A|1479
8CRX|1|A|A|1480
8CRX|1|A|G|1481
Current chains
- Chain A
- RNA (1537-MER)
Nearby chains
- Chain L
- 30S ribosomal protein S12
- Chain X
- 30S ribosomal protein bS22
- Chain Y
- 32MF mRNA
- Chain a
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: