IL_8CST_026
3D structure
- PDB id
- 8CST (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial small subunit assembly intermediate (State E)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.85 Å
Loop
- Sequence
- GCGGUG*CGCGU
- Length
- 11 nucleotides
- Bulged bases
- 8CST|1|A|G|1178
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8CST_026 not in the Motif Atlas
- Geometric match to IL_5TBW_121
- Geometric discrepancy: 0.3809
- The information below is about IL_5TBW_121
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_05145.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 13
Unit IDs
8CST|1|A|G|1176
8CST|1|A|C|1177
8CST|1|A|G|1178
8CST|1|A|G|1179
8CST|1|A|U|1180
8CST|1|A|G|1181
*
8CST|1|A|C|1473
8CST|1|A|G|1474
8CST|1|A|C|1475
8CST|1|A|G|1476
8CST|1|A|U|1477
Current chains
- Chain A
- 12S mitochondrial rRNA
Nearby chains
- Chain 6
- Putative ribosome-binding factor A, mitochondrial
- Chain C
- 28S ribosomal protein S24, mitochondrial
Coloring options: