IL_8CVK_273
3D structure
- PDB id
- 8CVK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.5 Å
Loop
- Sequence
- CU*AUAAG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8CVK_273 not in the Motif Atlas
- Geometric match to IL_7A0S_097
- Geometric discrepancy: 0.0624
- The information below is about IL_7A0S_097
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- Multiple bulged bases
- Motif group
- IL_42626.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 14
Unit IDs
8CVK|1|2A|C|2695
8CVK|1|2A|U|2696
*
8CVK|1|2A|A|2711
8CVK|1|2A|U|2712
8CVK|1|2A|A|2712|||A
8CVK|1|2A|A|2713
8CVK|1|2A|G|2714
Current chains
- Chain 2A
- 23S Ribosomal RNA
Nearby chains
- Chain 2R
- 50S ribosomal protein L17
- Chain 2T
- 50S ribosomal protein L19
Coloring options: