IL_8CVO_007

3D structure

PDB id

8CVO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cutibacterium acnes 30S ribosomal subunit with Sarecycline bound, head domain only in the local refined map

Experimental method

ELECTRON MICROSCOPY

Resolution

2.95 Å

Loop

Sequence

GGGAG*UGCCUCUUGGU

Length

16 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8CVO|1|A|G|987
8CVO|1|A|G|988
8CVO|1|A|G|989
8CVO|1|A|A|990
8CVO|1|A|G|991
*
8CVO|1|A|U|1008
8CVO|1|A|G|1009
8CVO|1|A|C|1010
8CVO|1|A|C|1011
8CVO|1|A|U|1012
8CVO|1|A|C|1013
8CVO|1|A|U|1014
8CVO|1|A|U|1015
8CVO|1|A|G|1020
8CVO|1|A|G|1021
8CVO|1|A|U|1022

Current chains

Chain A

16S ribosomal RNA

Nearby chains