IL_8CWO_018
3D structure
- PDB id
- 8CWO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cutibacterium acnes 30S ribosomal subunit with Sarecycline bound, body domain only in the local refined map
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.84 Å
Loop
- Sequence
- GGAUGACG*UGUAAAC
- Length
- 15 nucleotides
- Bulged bases
- 8CWO|1|A|U|414
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8CWO_018 not in the Motif Atlas
- Homologous match to IL_4LFB_017
- Geometric discrepancy: 0.1125
- The information below is about IL_4LFB_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_62329.1
- Basepair signature
- cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW
- Number of instances in this motif group
- 2
Unit IDs
8CWO|1|A|G|411
8CWO|1|A|G|412
8CWO|1|A|A|413
8CWO|1|A|U|414
8CWO|1|A|G|415
8CWO|1|A|A|416
8CWO|1|A|C|417
8CWO|1|A|G|418
*
8CWO|1|A|U|429
8CWO|1|A|G|430
8CWO|1|A|U|431
8CWO|1|A|A|432
8CWO|1|A|A|433
8CWO|1|A|A|434
8CWO|1|A|C|435
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain D
- 30S ribosomal protein S4
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