IL_8CWO_027
3D structure
- PDB id
- 8CWO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cutibacterium acnes 30S ribosomal subunit with Sarecycline bound, body domain only in the local refined map
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.84 Å
Loop
- Sequence
- UGUAAUC*GCGUG
- Length
- 12 nucleotides
- Bulged bases
- 8CWO|1|A|U|614
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8CWO_027 not in the Motif Atlas
- Geometric match to IL_8C3A_433
- Geometric discrepancy: 0.282
- The information below is about IL_8C3A_433
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_83023.1
- Basepair signature
- cWW-R-L-R-L-R-L-L-L-L
- Number of instances in this motif group
- 1
Unit IDs
8CWO|1|A|U|587
8CWO|1|A|G|588
8CWO|1|A|U|589
8CWO|1|A|A|590
8CWO|1|A|A|591
8CWO|1|A|U|592
8CWO|1|A|C|593
*
8CWO|1|A|G|611
8CWO|1|A|C|612
8CWO|1|A|G|613
8CWO|1|A|U|614
8CWO|1|A|G|615
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain H
- 30S ribosomal protein S8
- Chain P
- 30S ribosomal protein S16
- Chain Q
- 30S ribosomal protein S17
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