IL_8E0F_001
3D structure
- PDB id
- 8E0F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human Adenosine Deaminase Acting on dsRNA (ADAR2-RD) bound to dsRNA containing a G-G pair adjacent to the target site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.7 Å
Loop
- Sequence
- CG(8AZ)G*CCGG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: 8AZ
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_09990.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
8E0F|1|C|C|11
8E0F|1|C|G|12
8E0F|1|C|8AZ|13
8E0F|1|C|G|14
*
8E0F|1|D|C|19
8E0F|1|D|C|20
8E0F|1|D|G|21
8E0F|1|D|G|22
Current chains
- Chain C
- RNA (5-R(*GP*CP*UP*CP*GP*CP*GP*AP*UP*GP*CP*GP*(8AZ)P*GP*AP*GP*GP*GP*CP* UP*CP*UP*GP*AP*UP*AP*GP*CP*UP*AP*CP*G)-3)
- Chain D
- RNA(5-R(*CP*GP*UP*AP*GP*CP*UP*AP*UP*CP*AP*GP*AP*GP*CP*CP*CP*CP*CP*CP*GP*GP*CP*AP*UP*CP*GP*CP*GP*AP*GP*C)-3)
Nearby chains
- Chain A
- Double-stranded RNA-specific editase 1
- Chain B
- Double-stranded RNA-specific editase 1
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