IL_8ETI_005
3D structure
- PDB id
- 8ETI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Fkbp39 associated 60S nascent ribosome State 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- AU*AGUUGU
- Length
- 8 nucleotides
- Bulged bases
- 8ETI|1|1|U|153
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8ETI_005 not in the Motif Atlas
- Geometric match to IL_5TBW_007
- Geometric discrepancy: 0.1076
- The information below is about IL_5TBW_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_19724.3
- Basepair signature
- cWW-cWW-L-cWW-L
- Number of instances in this motif group
- 4
Unit IDs
8ETI|1|1|A|123
8ETI|1|1|U|124
*
8ETI|1|1|A|150
8ETI|1|1|G|151
8ETI|1|1|U|152
8ETI|1|1|U|153
8ETI|1|1|G|154
8ETI|1|1|U|155
Current chains
- Chain 1
- RNA (1564-MER)
Nearby chains
- Chain 2
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain G
- 60S ribosomal protein L8
- Chain N
- 60S ribosomal protein L15-A
- Chain m
- Ribosome biogenesis protein erb1
- Chain n
- Pescadillo homolog
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