IL_8ETI_006
3D structure
- PDB id
- 8ETI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Fkbp39 associated 60S nascent ribosome State 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CUG*CCG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8ETI_006 not in the Motif Atlas
- Homologous match to IL_8C3A_008
- Geometric discrepancy: 0.1042
- The information below is about IL_8C3A_008
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
8ETI|1|1|C|125
8ETI|1|1|U|126
8ETI|1|1|G|127
*
8ETI|1|1|C|147
8ETI|1|1|C|148
8ETI|1|1|G|149
Current chains
- Chain 1
- RNA (1564-MER)
Nearby chains
- Chain 2
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain G
- 60S ribosomal protein L8
- Chain N
- 60S ribosomal protein L15-A
- Chain X
- 60S ribosomal protein L25-A
- Chain h
- 60S ribosomal protein L35
- Chain m
- Ribosome biogenesis protein erb1
- Chain n
- Pescadillo homolog
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