IL_8ETI_007
3D structure
- PDB id
- 8ETI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Fkbp39 associated 60S nascent ribosome State 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- AAG*CUUU
- Length
- 7 nucleotides
- Bulged bases
- 8ETI|1|1|U|269
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8ETI_007 not in the Motif Atlas
- Geometric match to IL_4V9F_097
- Geometric discrepancy: 0.2144
- The information below is about IL_4V9F_097
- Detailed Annotation
- Isolated non-canonical cWW with bulges
- Broad Annotation
- Isolated non-canonical cWW with bulges
- Motif group
- IL_68118.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 27
Unit IDs
8ETI|1|1|A|165
8ETI|1|1|A|166
8ETI|1|1|G|167
*
8ETI|1|1|C|267
8ETI|1|1|U|268
8ETI|1|1|U|269
8ETI|1|1|U|270
Current chains
- Chain 1
- RNA (1564-MER)
Nearby chains
- Chain D
- ATP-dependent RNA helicase has1
- Chain L
- 60S ribosomal protein L13
- Chain m
- Ribosome biogenesis protein erb1
- Chain v
- Nucleolar protein 16
Coloring options: