IL_8ETI_010
3D structure
- PDB id
- 8ETI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Fkbp39 associated 60S nascent ribosome State 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GAG*CC
- Length
- 5 nucleotides
- Bulged bases
- 8ETI|1|1|A|176
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8ETI_010 not in the Motif Atlas
- Geometric match to IL_5FJC_001
- Geometric discrepancy: 0.2051
- The information below is about IL_5FJC_001
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_14190.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 134
Unit IDs
8ETI|1|1|G|175
8ETI|1|1|A|176
8ETI|1|1|G|177
*
8ETI|1|1|C|255
8ETI|1|1|C|256
Current chains
- Chain 1
- RNA (1564-MER)
Nearby chains
- Chain L
- 60S ribosomal protein L13
- Chain N
- 60S ribosomal protein L15-A
- Chain h
- 60S ribosomal protein L35
- Chain m
- Ribosome biogenesis protein erb1
- Chain v
- Nucleolar protein 16
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