IL_8ETI_012
3D structure
- PDB id
- 8ETI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Fkbp39 associated 60S nascent ribosome State 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UCGG*UCGA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8ETI_012 not in the Motif Atlas
- Geometric match to IL_4WF9_110
- Geometric discrepancy: 0.254
- The information below is about IL_4WF9_110
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_15225.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 33
Unit IDs
8ETI|1|1|U|187
8ETI|1|1|C|188
8ETI|1|1|G|189
8ETI|1|1|G|190
*
8ETI|1|1|U|242
8ETI|1|1|C|243
8ETI|1|1|G|244
8ETI|1|1|A|245
Current chains
- Chain 1
- RNA (1564-MER)
Nearby chains
- Chain 2
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain Y
- 60S ribosomal protein L26
- Chain j
- 60S ribosomal protein L37-B
- Chain v
- Nucleolar protein 16
Coloring options: