IL_8ETI_022
3D structure
- PDB id
- 8ETI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Fkbp39 associated 60S nascent ribosome State 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GGAAAAAGA*UGUAAUAC
- Length
- 17 nucleotides
- Bulged bases
- 8ETI|1|1|A|530, 8ETI|1|1|A|531, 8ETI|1|1|U|592
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8ETI_022 not in the Motif Atlas
- Geometric match to IL_5TBW_019
- Geometric discrepancy: 0.3706
- The information below is about IL_5TBW_019
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_74024.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 2
Unit IDs
8ETI|1|1|G|528
8ETI|1|1|G|529
8ETI|1|1|A|530
8ETI|1|1|A|531
8ETI|1|1|A|532
8ETI|1|1|A|533
8ETI|1|1|A|534
8ETI|1|1|G|535
8ETI|1|1|A|536
*
8ETI|1|1|U|590
8ETI|1|1|G|591
8ETI|1|1|U|592
8ETI|1|1|A|593
8ETI|1|1|A|594
8ETI|1|1|U|595
8ETI|1|1|A|596
8ETI|1|1|C|597
Current chains
- Chain 1
- RNA (1564-MER)
Nearby chains
- Chain C
- 60S ribosomal protein L4-B
- Chain F
- 60S ribosomal protein L7-B
- Chain M
- 60S ribosomal protein L14
- Chain S
- 60S ribosomal protein L20-A
Coloring options: