3D structure

PDB id
8ETI (explore in PDB, NAKB, or RNA 3D Hub)
Description
Fkbp39 associated 60S nascent ribosome State 1
Experimental method
ELECTRON MICROSCOPY
Resolution
3.7 Å

Loop

Sequence
GAAGGUGG*UUUAUAGC
Length
16 nucleotides
Bulged bases
8ETI|1|1|G|546, 8ETI|1|1|U|580
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8ETI|1|1|G|543
8ETI|1|1|A|544
8ETI|1|1|A|545
8ETI|1|1|G|546
8ETI|1|1|G|547
8ETI|1|1|U|548
8ETI|1|1|G|549
8ETI|1|1|G|550
*
8ETI|1|1|U|576
8ETI|1|1|U|577
8ETI|1|1|U|578
8ETI|1|1|A|579
8ETI|1|1|U|580
8ETI|1|1|A|581
8ETI|1|1|G|582
8ETI|1|1|C|583

Current chains

Chain 1
RNA (1564-MER)

Nearby chains

Chain M
60S ribosomal protein L14
Chain S
60S ribosomal protein L20-A

Coloring options:

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