IL_8ETI_025
3D structure
- PDB id
- 8ETI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Fkbp39 associated 60S nascent ribosome State 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GUUUG*CAUCC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8ETI_025 not in the Motif Atlas
- Homologous match to IL_5TBW_022
- Geometric discrepancy: 0.1689
- The information below is about IL_5TBW_022
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_74284.1
- Basepair signature
- cWW-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 2
Unit IDs
8ETI|1|1|G|705
8ETI|1|1|U|706
8ETI|1|1|U|707
8ETI|1|1|U|708
8ETI|1|1|G|709
*
8ETI|1|1|C|723
8ETI|1|1|A|724
8ETI|1|1|U|725
8ETI|1|1|C|726
8ETI|1|1|C|727
Current chains
- Chain 1
- RNA (1564-MER)
Nearby chains
- Chain A
- Ribosome biogenesis protein brx1
- Chain C
- 60S ribosomal protein L4-B
- Chain L
- 60S ribosomal protein L13
- Chain N
- 60S ribosomal protein L15-A
- Chain Q
- 60S ribosomal protein L18-A
- Chain v
- Nucleolar protein 16
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