IL_8ETI_031

3D structure

PDB id

8ETI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Fkbp39 associated 60S nascent ribosome State 1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

AGU*AU

Length

5 nucleotides

Bulged bases

8ETI|1|1|G|1016

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8ETI_031 not in the Motif Atlas

Geometric match to IL_5TBW_037

Geometric discrepancy: 0.2606

The information below is about IL_5TBW_037

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_00225.7

Basepair signature

cWW-L-cWW

Number of instances in this motif group

49

Unit IDs

8ETI|1|1|A|1015
8ETI|1|1|G|1016
8ETI|1|1|U|1017
*
8ETI|1|1|A|1131
8ETI|1|1|U|1132

Current chains

Chain 1

RNA (1564-MER)

Nearby chains

Chain F

60S ribosomal protein L7-B

Chain T

60S ribosomal protein L21-A