IL_8ETI_033

3D structure

PDB id

8ETI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Fkbp39 associated 60S nascent ribosome State 1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UUUG*CAGA

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8ETI_033 not in the Motif Atlas

Geometric match to IL_4WF9_109

Geometric discrepancy: 0.3584

The information below is about IL_4WF9_109

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_30621.4

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

66

Unit IDs

8ETI|1|1|U|1154
8ETI|1|1|U|1155
8ETI|1|1|U|1156
8ETI|1|1|G|1157
*
8ETI|1|1|C|1163
8ETI|1|1|A|1164
8ETI|1|1|G|1165
8ETI|1|1|A|1166

Current chains

Chain 1

RNA (1564-MER)

Nearby chains