IL_8ETI_042

3D structure

PDB id

8ETI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Fkbp39 associated 60S nascent ribosome State 1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GUGGC*GAAUC

Length

10 nucleotides

Bulged bases

8ETI|1|1|G|1267

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8ETI_042 not in the Motif Atlas

Homologous match to IL_8C3A_058

Geometric discrepancy: 0.4985

The information below is about IL_8C3A_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_30542.5

Basepair signature

cWW-L-R-L-R-L-cWW

Number of instances in this motif group

2

Unit IDs

8ETI|1|1|G|1265
8ETI|1|1|U|1266
8ETI|1|1|G|1267
8ETI|1|1|G|1268
8ETI|1|1|C|1269
*
8ETI|1|1|G|1281
8ETI|1|1|A|1282
8ETI|1|1|A|1283
8ETI|1|1|U|1284
8ETI|1|1|C|1285

Current chains

Chain 1

RNA (1564-MER)

Nearby chains