IL_8ETI_046
3D structure
- PDB id
- 8ETI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Fkbp39 associated 60S nascent ribosome State 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UGACGAAG*UCGAA
- Length
- 13 nucleotides
- Bulged bases
- 8ETI|1|1|C|1425
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8ETI_046 not in the Motif Atlas
- Homologous match to IL_5TBW_059
- Geometric discrepancy: 0.1116
- The information below is about IL_5TBW_059
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_70923.5
- Basepair signature
- cWW-cWW-tSS-tSH-tHS-cWW-tHS
- Number of instances in this motif group
- 32
Unit IDs
8ETI|1|1|U|1422
8ETI|1|1|G|1423
8ETI|1|1|A|1424
8ETI|1|1|C|1425
8ETI|1|1|G|1426
8ETI|1|1|A|1427
8ETI|1|1|A|1428
8ETI|1|1|G|1429
*
8ETI|1|1|U|1449
8ETI|1|1|C|1450
8ETI|1|1|G|1451
8ETI|1|1|A|1452
8ETI|1|1|A|1453
Current chains
- Chain 1
- RNA (1564-MER)
Nearby chains
- Chain 2
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain 3
- Protein mak16
- Chain C
- 60S ribosomal protein L4-B
- Chain P
- 60S ribosomal protein L17-A
- Chain Y
- 60S ribosomal protein L26
- Chain e
- 60S ribosomal protein L32-A
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